Protein ZmOrphan160
ZmOrphan160 is a protein in the Orphans family.
Information
Orphans Name: ZmOrphan160
Species: Maize
Orphans Family: Orphans
Gene Name(Synonym):
Uniprot ID: C0HE04
Subgenome: 2

Protein ZmOrphan160

ZmOrphan160 is a protein in the Orphans family.

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d013555DAPseq no logo sequence fimo position
Zm00001d013555DAPseq no logo sequence fimo position
Zm00001d013555ChIPseq no logo sequence fimo position
Zm00001d013555PChIPseq no logo sequence fimo position

Interactions where ZmOrphan160 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmOrphan160 is the target  
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There are 19 protein-dna interactions that fit this criteria. download excel sheet

GRMZM2G033612_T01 from maize genome v3

Amino Acid Sequence
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MSAEFCAAAGVVAMELGVGDVLGLQQGIAITAPSPRDSDLGLLKRAGLTQAAAAAPYPSPFLDEEKMLRFSKAAHTLHSG
LDFGGPGEQAFLLSRTKMPFTPSQWMELEHQALIYKYLNAKAPPYLPACSFQSARASDHPIEVLNQKTKVFYFKTTGTCN
QPR

MSAEFCAAAGVVAMELGVGDVLGLQQGIAITAPSPRDSDLGLLKRAGLTQAAAAAPYPSPFLDEEKMLRFSKAAHTLHSG
LDFGGPGEQAFLLSRTKMPFTPSQWMELEHQALIYKYLNAKAPPYLPACSFQSARASDHPIEVLNQKTKVFYFKTTGTCN
QPR

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available

Nucleotide Sequence
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CCAACAATGCACACCAACATCCACT...

GRMZM2G033612_T02 from maize genome v3


Related TFome: pUT6511

Amino Acid Sequence
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MADHKYCERHINRNRHRSRKPVENQPKKTTKEVPAAAGSLPCAGPQGSLKKAKVNDSKPGTVSYWADSLNRTMLSREKAN
KPTEDSSLLLTSTNSQPTLSLLSQLKQQNKPDKLGPTLENESNPDTILKAWGGNQPSHKSISSTERHDAESLQSVLQNFS
LAQNEKMESEKNKYSDSVLVSSTFYSADGPRATCLTPNMTQVKQDCISSSWEMPQGGPLGEILTNSKNSKDLSKCKPRSY
GWLLNLDHAP

Nucleotide Sequence
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CCAACAATGCACACCAACATCCACT...

Zm00001d013555_T001 from maize genome v4

Amino Acid Sequence
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MSAEFCAAAGVVAMELGVGDVLGLQQGIAITAPSPRDSDLGLLKRAGLTQAAAAAPYPSPFLDEEKMLRFSKAAHTLHSG
LDFGGPGEQAFLLSRTKMPFTPSQWMELEHQALIYKYLNAKAPPYLPACSFQSARASDHPIESLTDFSNAVSWRPLYQGY
TNADSDPEPGRCRRTDGKKWRCSKEAMADHKYCERHINRNRHRSRKPVENQPKKTTKEVPAAAGSLPCAGPQGSLKKAKV
NDSKPGTVSYWADSLNRTMLSREKANKPTEDSSLLLTSTNSQPTLSLLSQLKQQNKPDKLGPTLENESNPDTILKAWGGN
QPSHKSISSTERHDAESLQSVLQNFSLAQNEKMESEKNKYSDSVLVSSTFYSADGPRATCLTPNMTQVKQDCISSSWEMP
QGGPLGEILTNSKNSKDLSKCKPRSYGWLLNLDHAP

Nucleotide Sequence
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GCCTCCCAGGCTCCCACTAGAAAAG...

Zm00001d013555_T002 from maize genome v4

Amino Acid Sequence
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MADHKYCERHINRNRHRSRKPVENQPKKTTKEVPAAAGSLPCAGPQGSLKKAKVNDSKPGTVSYWADSLNRTMLSREKAN
KPTEDSSLLLTSTNSQPTLSLLSQLKQQNKPDKLGPTLENESNPDTILKAWGGNQPSHKSISSTERHDAESLQSVLQNFS
LAQNEKMESEKNKYSDSVLVSSTFYSADGPRATCLTPNMTQVKQDCISSSWEMPQGGPLGEILTNSKNSKDLSKCKPRSY
GWLLNLDHAP

Nucleotide Sequence
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GCCTCCCAGGCTCCCACTAGAAAAG...

Zm00001d013555_T003 from maize genome v4

Amino Acid Sequence
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MSAEFCAAAGVVAMELGVGDVLGLQQGIAITAPSPRDSDLGLLKRAGLTQAAAAAPYPSPFLDEEKMLRFSKAAHTLHSG
LDFGGPGEQAFLLSRTKMPFTPSQWMELEHQALIYKYLNAKAPPYLPACSFQSARASDHPIESLTDFSNAVSWRPLYQGY
TNADSDPEPGRCRRTDGKKWRCSKEAMADHKYCERHINRNRHRSRKPVENQPKKTTKEVPAAAGSLPCAGPQGSLKKAKV
NDSKPGTVSYWADSLNRTMLSREKANKPTEDSSLLLTSTNSQPTLSLLSQLKQQNKPDKLGPTLENESNPDTILKAWGGN
QPSHKSISSTERHDAESLQSVLQNFSLAQNEKMESEKNKYSDSVLVSSTFYSADGPRATCLTPNMTQVKQDCISSSWEMP
QGGPLGEILTNSKNSKDLSKCKPRSYGWLLNLDHAP

Nucleotide Sequence
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GCCGCCCAGCGCCCACCCACACCCC...

Zm00001d013555_T004 from maize genome v4

Amino Acid Sequence
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MADHKYCERHINRNRHRSRKPVENQPKKTTKEVPAAAGSLPCAGPQGSLKKAKVNDSKPGTVSYWADSLNRTMLSREKAN
KPTEDSSLLLTSTNSQPTLSLLSQLKQQNKPDKLGPTLENESNPDTILKAWGGNQPSHKSISSTERHDAESLQSVLQNFS
LAQNEKMESEKNKYSDSVLVSSTFYSADGPRATCLTPNMTQVKQDCISSSWEMPQGGPLGEILTNSKNSKDLSKCKPRSY
GWLLNLDHAP

Nucleotide Sequence
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GCCGCCCAGCGCCCACCCACACCCC...

Zm00001eb217440_T001 from maize genome v5

Amino Acid Sequence
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MADHKYCERHINRNRHRSRKPVENQPKKTTKEVPAAAGSLPCAGPQGSLKKAKVNDSKPGTVSYWADSLNRTMLSREKAN
KPTEDSSLLLTSTNSQPTLSLLSQLKQQNKPDKLGPTLENESNPDTILKAWGGNQPSHKSISSTERHDAESLQSVLQNFS
LAQNEKMESEKNKYSDSVLVSSTFYSADGPRATCLTPNMTQVKQDCISSSWEMPQGGPLGEILTNSKNSKDLSKCKPRSY
GWLLNLDHAP

Nucleotide Sequence
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CCACTAGAAAAGCACACCCACCTTC...


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